吉首大学学报(自然科学版) ›› 2024, Vol. 45 ›› Issue (5): 52-60.DOI: 10.13438/j.cnki.jdzk.2024.05.007

• 生物 • 上一篇    下一篇

前列腺增生患者手术前后尿液菌群特征与功能

彭乔木,范诗秋,田晶晶,向涛,李辉,瞿昕怡   

  1. (1.吉首大学医学院,湖南 吉首 416000;2.吉首大学第一附属医院,湖南 吉首 416000)
  • 出版日期:2024-09-25 发布日期:2024-11-08
  • 作者简介:彭乔木(1997—),男,湖南吉首人,吉首大学医学院硕士研究生,主要从事泌尿系肿瘤研究
  • 基金资助:
    湖南省重点研发计划项目(2022NK2055);湖南省大学生创新创业训练项目(S202310531067)

Characteristics and Function of the Urine Microbiome from Prostatic Hyperplasia Patients

PENG Qiaomu,FAN Shiqiu,TIAN Jingjing,XIANG Tao,LI Hui,QU Xinyi   

  1. (1.School of Medicine,Jishou University,Jishou 416000,Hunan China;2.The First Affiliated Hospital ofJishou University,Jishou 416000,Hunan China)
  • Online:2024-09-25 Published:2024-11-08

摘要:为了阐明前列腺增生患者术前和术后尿液菌群特征,探究差异微生物类群发挥作用的机理,采用宏基因组鸟枪法对健康人群(对照)、前列腺增生患者术前和术后尿液样品进行测序,并利用相关软件进行生物信息学分析.结果表明:尿液微生物多样性呈现出术前组明显低于对照组和术后组;在门水平上,厚壁菌门(Firmicutes)、放线菌门(Actinobacteria)、拟杆菌门(Bacteroidetes)的丰度在对照组和术后组之间无明显差异,但均显著高于术前组;在属水平上,大肠杆菌属(Escherichia)、假单胞菌属(Pseudomonas)、不动杆菌属(Acinetobacter)、志贺氏杆菌属(Shigella)的丰度在对照组和术后组之间无明显差异,但均低于术前组,而链球菌属(Streptococcus)、普氏菌属(Prevotella)的丰度在对照组和术后组之间无明显差异,但均高于术前组.PHI-base数据库功能注释发现,差异菌群的一些弱毒力因子、非影响致病因子、增毒因子、致死因子等丰度呈现出术前组明显高于对照组和术后组,术后这些互作因子的丰度基本恢复到对照组水平;VFBD数据库功能注释发现,毒力因子IV型菌毛、荚膜I、鞭毛、III型分泌系统、大肠杆菌素、肠杆菌素等丰度也呈现出术前组明显高于对照组和术后组,术后这些毒力因子的丰度也能基本恢复到健康水平.以上结果暗示尿路微生物多样性降低、特异微生物类群丰度显著变化可能与患者前列腺增生呈正相关关系,患者尿路差异菌群中一些互作因子和毒力因子的丰度升高可能诱发前列腺增生.

关键词: 前列腺增生, 尿液菌群, 宏基因组测序, 物种丰度, 功能注释

Abstract: This work is to analyze the community structure and species abundance of urine microbiome,as well as the differential microflora in three groups of healthy people,preoperative and postoperative prostatic hyperplasia patients,and to unearth the mechanism of the differential microflora related to the development of prostatic hyperplasia.Urine samples from healthy people (control group,C),preoperative (patient group,B) and postoperative (postoperative group,S) patients with prostatic hyperplasia were collected,and sequenced by whole metagenome shotgun sequencing.Bioinformatics analysis was carried out by related software.The results were as follows:the microbial diversity of B group samples (preoperative BPH patients) was lower than that of C and S groups of samples.At the phylum level,the abundance of Firmicutes,Actinobacteria and Bacteroidetes between C and S groups had no difference,but was significantly higher than that of B group.At the genus level,the abundance of Escherichia,Pseudomonas,Acinetobacter and Shigella between C and S groups had no difference,but was lower than that of B group;the abundance of Streptococcus and Prevotella in C and S groups of samples had no difference,but was higher than that of B group.Functional annotation at the PHI-base database showed that the abundance of some mutualistic factors in B group were significantly higher than that of C and S groups,such as reduced virulence factors,unaffected pathogenicity factors,increased virulence factors and lethal factor,then tended to return to the level of healthy people in S group.Functional annotation at the VFBD database showed that the abundance of some virulence factors in B group was significantly higher than that of both C and S groups,such as Type IV fimbria,capsule I,flagellum,Type III secretion system,colibactin,enterobactin,etc.,then tended to return to the level of healthy people in S group.In conclusion,decreased microbial diversity in the urinary tract microbiome and the increased or decreased abundance of the specific microbial taxa during the dysbiosis of urinary microflora might be positively correlated with prostatic hyperplasia of the patients.The increased abundance of some interaction factors and virulence factors of the differential microflora in the patient urine might induce the development of prostatic hyperplasia.

Key words: prostate hyperplasia, urine microbiome, metagenome sequencing, species abundance, function annotation

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